Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
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Molecular interactions
Regulation
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Supporting evidence
ID History
- Gene history
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Gramene is produced in collaboration with Ensembl Plants

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Gene: AeUmb.TA1851.r1.3UG0001290

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Location

Primary_assembly 3U_TA1851: 12,974,190-12,981,750 reverse strand.

About this gene

This gene has 13 transcripts (splice variants), 233 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	AeUmb.TA1851.r1.3UG0001290.2	3706	1059aa	cds:AeUmb.TA1851.r1.3UG0001290.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	AeUmb.TA1851.r1.3UG0001290.3	3946	958aa	cds:AeUmb.TA1851.r1.3UG0001290.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.1	3703	1058aa	cds:AeUmb.TA1851.r1.3UG0001290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.9	3665	1059aa	cds:AeUmb.TA1851.r1.3UG0001290.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.8	3662	1058aa	cds:AeUmb.TA1851.r1.3UG0001290.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.7	3634	1059aa	cds:AeUmb.TA1851.r1.3UG0001290.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.4	3584	1059aa	cds:AeUmb.TA1851.r1.3UG0001290.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.5	3581	1058aa	cds:AeUmb.TA1851.r1.3UG0001290.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.6	3413	958aa	cds:AeUmb.TA1851.r1.3UG0001290.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.11	3282	776aa	cds:AeUmb.TA1851.r1.3UG0001290.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.12	2886	576aa	cds:AeUmb.TA1851.r1.3UG0001290.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.13	1644	486aa	cds:AeUmb.TA1851.r1.3UG0001290.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0001290.10	564	134aa	cds:AeUmb.TA1851.r1.3UG0001290.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data