Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history
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Gramene is produced in collaboration with Ensembl Plants

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Gene: AeUmb.TA1851.r1.4UG0017260

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Location

Primary_assembly 4U_TA1851: 145,302,854-145,317,039 forward strand.

About this gene

This gene has 10 transcripts (splice variants), 154 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	AeUmb.TA1851.r1.4UG0017260.10	1982	430aa	cds:AeUmb.TA1851.r1.4UG0017260.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	AeUmb.TA1851.r1.4UG0017260.6	2978	394aa	cds:AeUmb.TA1851.r1.4UG0017260.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.5	2228	394aa	cds:AeUmb.TA1851.r1.4UG0017260.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.4	2110	394aa	cds:AeUmb.TA1851.r1.4UG0017260.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.7	2004	394aa	cds:AeUmb.TA1851.r1.4UG0017260.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.1	1939	394aa	cds:AeUmb.TA1851.r1.4UG0017260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.8	1915	394aa	cds:AeUmb.TA1851.r1.4UG0017260.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.2	1883	394aa	cds:AeUmb.TA1851.r1.4UG0017260.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.9	1842	394aa	cds:AeUmb.TA1851.r1.4UG0017260.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.4UG0017260.3	1661	394aa	cds:AeUmb.TA1851.r1.4UG0017260.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data