Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history
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Gramene is produced in collaboration with Ensembl Plants

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Gene: AeUmb.TA1851.r1.3UG0009500

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Location

Primary_assembly 3U_TA1851: 157,917,982-157,920,729 reverse strand.

About this gene

This gene has 8 transcripts (splice variants), 137 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	AeUmb.TA1851.r1.3UG0009500.5	2587	394aa	cds:AeUmb.TA1851.r1.3UG0009500.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	AeUmb.TA1851.r1.3UG0009500.3	2011	394aa	cds:AeUmb.TA1851.r1.3UG0009500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0009500.1	1998	394aa	cds:AeUmb.TA1851.r1.3UG0009500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0009500.6	1955	394aa	cds:AeUmb.TA1851.r1.3UG0009500.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0009500.4	1942	394aa	cds:AeUmb.TA1851.r1.3UG0009500.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0009500.2	1871	394aa	cds:AeUmb.TA1851.r1.3UG0009500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0009500.8	1320	394aa	cds:AeUmb.TA1851.r1.3UG0009500.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	AeUmb.TA1851.r1.3UG0009500.7	1193	394aa	cds:AeUmb.TA1851.r1.3UG0009500.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Literature

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There are no hits for this gene from Europe PubMed Central

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Personal Data