Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
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ID History
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Gramene is produced in collaboration with Ensembl Plants

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Gene: AT5G55220

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Description

trigger factor type chaperone family protein [Source:NCBI gene (formerly Entrezgene);Acc:835615]

Gene Synonyms

MCO15.17, MCO15_17

Location

Chromosome 5: 22,397,457-22,400,856 forward strand.

About this gene

This gene has 1 transcript (splice variant), 144 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G55220-201	AT5G55220.1	2042	547aa	AT5G55220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2FI86 Q8S9L5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Literature

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Showing the top 11 hits from Europe PubMed Central

PubMed ID	Title	Authors	Journal
39805826	A truncated variant of the ribosome-associated trigger factor specifically contributes to plant chloroplast ribosome biogenesis.	Ries F, Gorlt J, Kaiser S, Scherer V, Seydel C, Nguyen S, Klingl A, Legen J, Schmitz-Linneweber C, Plaggenborg H, Ng JZY, Wiens D, Hochberg GKA, Räschle M, Möhlmann T, Scheuring D, Willmund F.	Nat Commun 16 (1) 2025
36510301	A simple and robust method for isolating and analyzing chromatin-bound RNAs in Arabidopsis.	Zhang Q, Zhao F, Wu Z, Zhu D.	Plant Methods 18 (1) 2022
39143125	Proteomic profiling of Arabidopsis nuclei reveals distinct protein accumulation kinetics upon heat stress.	Muñoz-Díaz E, Fuenzalida-Valdivia I, Darrière T, de Bures A, Blanco-Herrera F, Rompais M, Carapito C, Sáez-Vásquez J.	Sci Rep 14 (1) 2024
34064964	PRAT Proteins Operate in Organellar Protein Import and Export in Arabidopsis thaliana.	Rossig C, Gray J, Valdes O, Springer A, Rustgi S, von Wettstein D, Reinbothe C, Rassow J, Reinbothe S.	Plants (Basel) 10 (5) 2021
32460700	Spaceflight induces novel regulatory responses in Arabidopsis seedling as revealed by combined proteomic and transcriptomic analyses.	Kruse CPS, Meyers AD, Basu P, Hutchinson S, Luesse DR, Wyatt SE.	BMC Plant Biol 20 (1) 2020
35693169	A Conserved Long Intergenic Non-coding RNA Containing snoRNA Sequences, lncCOBRA1, Affects Arabidopsis Germination and Development.	Kramer MC, Kim HJ, Palos KR, Garcia BA, Lyons E, Beilstein MA, Nelson ADL, Gregory BD.	Front Plant Sci 13 2022
33396785	Recent Findings Unravel Genes and Genetic Factors Underlying Leptosphaeria maculans Resistance in Brassica napus and Its Relatives.	Cantila AY, Saad NSM, Amas JC, Edwards D, Batley J.	Int J Mol Sci 22 (1) 2020
23418598	Natural variation identifies multiple loci controlling petal shape and size in Arabidopsis thaliana.	Abraham MC, Metheetrairut C, Irish VF.	PLoS One 8 (2) 2013
15701785	Chlamydomonas immunophilins and parvulins: survey and critical assessment of gene models.	Vallon O.	Eukaryot Cell 4 (2) 2005
23733786	Expansion of the pseudo-autosomal region and ongoing recombination suppression in the Silene latifolia sex chromosomes.	Bergero R, Qiu S, Forrest A, Borthwick H, Charlesworth D.	Genetics 194 (3) 2013
15282545	The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis.	Hass C, Lohrmann J, Albrecht V, Sweere U, Hummel F, Yoo SD, Hwang I, Zhu T, Schäfer E, Kudla J, Harter K.	EMBO J 23 (16) 2004

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