Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Plant Compara
Pan-taxonomic Compara
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Ontologies
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Gramene is produced in collaboration with Ensembl Plants

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Gene: LOC114375809

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Description

glutamine synthetase leaf isozyme, chloroplastic-like, transcript variant X1

Location

Primary_assembly CM014367.1: 40,058,206-40,064,095 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 192 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_028333672.1	1827	432aa	XP_028189473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A445I881	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
-	XM_028333674.1	1796	432aa	XP_028189475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A445I881	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
-	XM_028333673.1	1595	432aa	XP_028189474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A445I881	GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree (Not available)

Orthologues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data