Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history
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Gramene is produced in collaboration with Ensembl Plants

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Gene: PGSC0003DMG400015777

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Description

Patatin class 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015777]

Location

Chromosome 2: 44,000,617-44,002,562 forward strand.

About this gene

This gene has 2 transcripts (splice variants), 6 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	PGSC0003DMT400040802	453	150aa	PGSC0003DMT400040802	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BAF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400040803	1356	80aa	PGSC0003DMT400040803	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BAG0	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data