Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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Regulation
External references
Supporting evidence
ID History
- Gene history
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Gramene is produced in collaboration with Ensembl Plants

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Gene: PGSC0003DMG400008749

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Description

Patatin-05 [Source:PGSC_GENE;Acc:PGSC0003DMG400008749]

Location

Chromosome 8: 1,435,831-1,439,140 reverse strand.

About this gene

This gene has 1 transcript (splice variant), 201 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	PGSC0003DMT400022567	1047	348aa	PGSC0003DMT400022567	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AGX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Literature

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Showing the top 3 hits from Europe PubMed Central

PubMed ID	Title	Authors	Journal
32751417	Drought-Induced Regulatory Cascades and Their Effects on the Nutritional Quality of Developing Potato Tubers.	Da Ros L, Elferjani R, Soolanayakanahally R, Kagale S, Pahari S, Kulkarni M, Wahab J, Bizimungu B.	Genes (Basel) 11 (8) 2020
26416294	Resistance to Streptomyces turgidiscabies in potato involves an early and sustained transcriptional reprogramming at initial stages of tuber formation.	Dees MW, Lysøe E, Alsheikh M, Davik J, Brurberg MB.	Mol Plant Pathol 17 (5) 2016
31980689	Transcriptome analysis of potato shoots, roots and stolons under nitrogen stress.	Tiwari JK, Buckseth T, Zinta R, Saraswati A, Singh RK, Rawat S, Dua VK, Chakrabarti SK.	Sci Rep 10 (1) 2020

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